TargetSearch

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see TargetSearch.

A package for the analysis of GC-MS metabolite profiling data


Bioconductor version: 3.13

This packages provides a targeted pre-processing method for GC-MS data.

Author: Alvaro Cuadros-Inostroza <acuadros+bioc at gmail.com>, Jan Lisec, Henning Redestig, Matt Hannah

Maintainer: Alvaro Cuadros-Inostroza <acuadros+bioc at gmail.com>

Citation (from within R, enter citation("TargetSearch")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TargetSearch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TargetSearch")
RI correction extra PDF R Script
The TargetSearch Package PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews DecisionTree, ImmunoOncology, MassSpectrometry, Preprocessing, Software
Version 1.48.0
In Bioconductor since BioC 2.4 (R-2.9) (15 years)
License GPL (>= 2)
Depends
Imports graphics, grDevices, methods, ncdf4, stats, utils, assertthat
System Requirements
URL https://github.com/acinostroza/TargetSearch
Bug Reports https://github.com/acinostroza/TargetSearch/issues
See More
Suggests TargetSearchData, BiocStyle, knitr, tinytest
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TargetSearch_1.48.0.tar.gz
Windows Binary TargetSearch_1.48.0.zip
macOS 10.13 (High Sierra) TargetSearch_1.48.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/TargetSearch
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TargetSearch
Bioc Package Browser https://code.bioconductor.org/browse/TargetSearch/
Package Short Url https://bioconductor.org/packages/TargetSearch/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive