Changes in version 1.2.0 o Moved from workflow to software section Changes in version 1.1.1 o Better manage transcript version o Manage output directory when calls are generated for several libraries o Manage transcript version when calls are generated for several libraries Changes in version 1.1.0 o Change kmer size of kallisto index from 21 to 15 for libraries with readLength <= 50bp o Can choose the output directory o By default use a simpler arborescence for the output directory o Can use reference intergenic sequences generated by the community o Can use custom reference intergenic sequences from a local fastq file Changes in version 1.0.0 o Public release of BgeeCall package. Enjoy!!!