### R code from vignette source 'vignettes/deepSNV/inst/doc/shearwater.Rnw'

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### code chunk number 1: setup
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require(knitr)
# set global chunk options
opts_chunk$set(fig.path='tmp/deepSNV-', fig.align='center', fig.show='hold', fig.width=4, fig.height=4, out.width='.4\\linewidth', dpi=150)
options(replace.assign=TRUE,width=75)
knit_hooks$set(nice = function(before, options, envir) {
			if (before) par(mar = c(4, 4, .1, .1), mgp=c(2.5,1,0), bty="n")
		})