CHANGES IN VERSION 1.0.3 ------------------------ o The following functions are updated + GRannotate, TSS: Txdb with duplicate transcript name was resulting in error in these functions. Now all the transcripts with duplicate transcript name are removed before performing annotation. CHANGES IN VERSION 1.0.2 ------------------------ o The following functions are updated + findLncRNA + GRannotateSimple CHANGES IN VERSION 1.0.0 ------------------------ o initial version with the following functions implemented: + GRbaseCoverage + GRcoverage + GRcoverageInbins + GRcoverageSummit + GRenrichment + countOverlapsInBins + stallingIndex + TSS + distanceFromTSS + GRangesInPromoters + GRmidpoint + GRannotate + GRannotateSimple + makeGtfFromDb + enhancers + matchEnhancers + topGOres + simplifyGOterms + findLncRNA + getPromoterClass + heatmapData + palette2d + heatmapPlot + plotStallingIndex + GR2fasta + overlapOfGRanges + GRsetwidth + unionMaxScore + GRanges2ucsc + ucsc2GRanges