To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("viper")

In most cases, you don't need to download the package archive at all.

viper

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see viper.

Virtual Inference of Protein-activity by Enriched Regulon analysis

Bioconductor version: 3.0

Inference of protein activity from gene expression data, including the VIPER and msVIPER algorithms

Author: Mariano J Alvarez <reef103 at gmail.com>

Maintainer: Mariano J Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("viper")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("viper")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("viper")

biocViews	FunctionalPrediction, GeneExpression, GeneRegulation, NetworkEnrichment, Software, SystemsBiology
Version	1.2.0
In Bioconductor since	BioC 2.14 (R-3.1) (2 years)
License	GPL (>=2)
Depends	R (>= 2.14.0), Biobase, methods
Imports	mixtools, stats
LinkingTo
Suggests	bcellViper
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	viper_1.2.0.tar.gz
Windows Binary	viper_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)	viper_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	viper_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/viper/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/viper/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: